DNA

Part:BBa_K1951000

Designed by: Claire raynaud, Yoann Santin, Louis Givelet   Group: iGEM16_Aix-Marseille   (2016-10-10)

DesA, lysine decarboxylase coding sequence

General information

DesA in the Desferrionxamine B pathway

Lysine descarboxylase (Streptomyces coelicolor) is an enzyme from the lyase family that converts lysine to cadaverine.

The enzyme realizes the carbonyl group of the lysin amino acid.

Cadaverine is a foul-smelling diamine compound produced by the putrefaction of animal tissue. Cadaverine is a toxic[1] diamine with the formula NH2(CH2)5NH2, which is similar to putrescine. Cadaverine is also known by the names 1,5-pentanediamine and pentamethylenediamine.

This enzyme is the first one involved in the production of desferrioxame B which is a well documented siderophore.

Detection method

In bacteriology, this enzyme is sought through the middle of Moeller lysine or medium lysine Taylor.

Be aware

Cadaverine is toxic in large doses. In rats it has a low acute oral toxicity of 2000 mg/kg body weight, with no-observed-adverse-effect level of 2000 ppm (180 mg/kg body weight/day).

It is a foul-smelling diamine compound.

Design summary

All forbidden restriction sites have been removed.

Codons have been optimized for E.coli to allow a maximal transcription level.

Experiment summary

The following biobrick functionality has been tested by our team in two different composite parts we designed :


[edit]
Categories
Parameters
None